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Started:
November 23, 2021 17:01
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Completed:
00:55:33.000
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Failed:
No.
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Status:
completed
Events (most recent first):
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19:25:40.000
(warns)
Trait Publishing failed: The transaction has been terminated. Retry your operation in a new transaction, and you should see a successful result. The transaction has not completed within the specified timeout (dbms.transaction.timeout). You may want to retry with a longer timeout. FROM /usr/local/bundle/bundler/gems/neo4j-ruby-driver-fe5438fb945d/ffi/neo4j/driver/internal/handlers/response_handler.rb:38:in `check_summary_failure' << /app/lib/trait_bank/slurp.rb:545:in `merge_triple' << /app/lib/trait_bank/slurp.rb:432:in `block in load_csv_where' << /app/lib/trait_bank/slurp.rb:432:in `each' << /app/lib/trait_bank/slurp.rb:432:in `load_csv_where' << /app/lib/trait_bank/slurp.rb:329:in `block (2 levels) in load_csv'
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17:49:40.000
(warns)
FAILED on build_nodes query (Trait), will re-try once...
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17:49:40.000
(warns)
The transaction has been terminated. Retry your operation in a new transaction, and you should see a successful result. The transaction has not completed within the specified timeout (dbms.transaction.timeout). You may want to retry with a longer timeout.
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17:07:44.000
(warns)
Skipping reindexing. You should reindex soon.
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17:06:30.000
(warns)
MISSING http://content.eol.org/data/NMNHtypes/publish_content_sections.tsv [404] (8 bytes); skipping
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17:06:30.000
(warns)
MISSING http://content.eol.org/data/NMNHtypes/publish_references.tsv [404] (8 bytes); skipping
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17:06:29.000
(warns)
MISSING http://content.eol.org/data/NMNHtypes/publish_image_info.tsv [404] (8 bytes); skipping
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17:06:29.000
(warns)
MISSING http://content.eol.org/data/NMNHtypes/publish_attributions.tsv [404] (8 bytes); skipping
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17:06:29.000
(warns)
MISSING http://content.eol.org/data/NMNHtypes/publish_media.tsv [404] (8 bytes); skipping
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17:06:29.000
(warns)
MISSING http://content.eol.org/data/NMNHtypes/publish_articles.tsv [404] (8 bytes); skipping
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17:06:29.000
(warns)
MISSING http://content.eol.org/data/NMNHtypes/publish_vernaculars.tsv [404] (8 bytes); skipping
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17:05:32.000
(warns)
INCORRECT NUMBER OF ROWS DURING IMPORT OF nodeancestors: got 1694561, expected 1694561 (from /app/tmp/NMNHtypes_node_ancestors.tsv)
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17:02:44.000
(warns)
INCORRECT NUMBER OF ROWS DURING IMPORT OF scientificnames: got 313067, expected 313067 (from /app/tmp/NMNHtypes_scientific_names.tsv)
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17:01:58.000
(warns)
MISSING http://content.eol.org/data/NMNHtypes/publish_identifiers.tsv [404] (8 bytes); skipping
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17:01:58.000
(warns)
MISSING http://content.eol.org/data/NMNHtypes/publish_bibliographic_citations.tsv [404] (8 bytes); skipping
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17:01:50.000
(warns)
INCORRECT NUMBER OF ROWS DURING IMPORT OF nodes: got 312952, expected 312952 (from /app/tmp/NMNHtypes_nodes.tsv)
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17:01:26.000
(warns)
MISSING http://content.eol.org/data/NMNHtypes/publish_referents.tsv [404] (8 bytes); skipping
