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Started:
April 16, 2024 11:35
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Completed:
13:18:23
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Failed:
No.
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Status:
completed
Events (most recent first):
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13:21:43
(infos)
resource.rb:505:in `background_republish'> content_server_connection.rb:104:in `log_info'> Connecting to https://content.eol.org/ ...
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13:21:43
(infos)
resource.rb:505:in `background_republish'> content_server_connection.rb:104:in `log_info'> /data/Globi/publish_traits.tsv: Scheme missing.
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13:21:43
(warns)
resource.rb:505:in `background_republish'> content_server_connection.rb:112:in `log_warn'> USING wget TO RETRIEVE FULL FILE...
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13:21:43
(warns)
resource.rb:505:in `background_republish'> content_server_connection.rb:112:in `log_warn'> TRUNCATED RESPONSE! Got 278483463 bytes out of 949928114 from https://content.eol.org/data/Globi/publish_traits.tsv
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13:21:27
(infos)
resource.rb:505:in `background_republish'> content_server_connection.rb:104:in `log_info'> Connecting to https://content.eol.org/ ...
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13:21:24
(infos)
resource.rb:505:in `background_republish'> content_server_connection.rb:104:in `log_info'> polling for trait diff metadata: /resources/20/publish_diffs.json
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13:18:32
(ends)
resource.rb:225:in `publish'> fast.rb:177:in `ensure in by_resource'> Complete
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13:18:21
(ends)
resource.rb:225:in `publish'> fast.rb:176:in `ensure in by_resource'> TOTAL TIME: 1.7h
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13:03:17
(infos)
each.rb:9:in `each'> slurp.rb:329:in `block in break_up_large_file'> Waiting 16 minutes for the part 8 of 24 to be added to neo4j.
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13:03:16
(infos)
each.rb:9:in `each'> slurp.rb:351:in `log_node_count'> Nodes: 0; Traits: 0; MetaData: 0
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13:02:45
(infos)
each.rb:9:in `each'> slurp.rb:275:in `block in load_csv'> Importing 128000 rows from publish_metadata_chunk_7.csv
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12:48:42
(infos)
each.rb:9:in `each'> slurp.rb:329:in `block in break_up_large_file'> Waiting 14 minutes for the part 7 of 24 to be added to neo4j.
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12:48:42
(infos)
each.rb:9:in `each'> slurp.rb:351:in `log_node_count'> Nodes: 0; Traits: 0; MetaData: 0
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12:48:12
(infos)
each.rb:9:in `each'> slurp.rb:275:in `block in load_csv'> Importing 128000 rows from publish_metadata_chunk_6.csv
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12:36:09
(infos)
each.rb:9:in `each'> slurp.rb:329:in `block in break_up_large_file'> Waiting 12 minutes for the part 6 of 24 to be added to neo4j.
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12:36:09
(infos)
each.rb:9:in `each'> slurp.rb:351:in `log_node_count'> Nodes: 0; Traits: 0; MetaData: 0
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12:35:43
(infos)
each.rb:9:in `each'> slurp.rb:275:in `block in load_csv'> Importing 128000 rows from publish_metadata_chunk_5.csv
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12:25:41
(infos)
each.rb:9:in `each'> slurp.rb:329:in `block in break_up_large_file'> Waiting 10 minutes for the part 5 of 24 to be added to neo4j.
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12:25:41
(infos)
each.rb:9:in `each'> slurp.rb:351:in `log_node_count'> Nodes: 0; Traits: 0; MetaData: 0
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12:25:15
(infos)
each.rb:9:in `each'> slurp.rb:275:in `block in load_csv'> Importing 128000 rows from publish_metadata_chunk_4.csv
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12:17:14
(infos)
each.rb:9:in `each'> slurp.rb:329:in `block in break_up_large_file'> Waiting 8 minutes for the part 4 of 24 to be added to neo4j.
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12:17:14
(infos)
each.rb:9:in `each'> slurp.rb:351:in `log_node_count'> Nodes: 0; Traits: 0; MetaData: 0
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12:16:46
(infos)
each.rb:9:in `each'> slurp.rb:275:in `block in load_csv'> Importing 128000 rows from publish_metadata_chunk_3.csv
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12:10:44
(infos)
each.rb:9:in `each'> slurp.rb:329:in `block in break_up_large_file'> Waiting 6 minutes for the part 3 of 24 to be added to neo4j.
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12:10:44
(infos)
each.rb:9:in `each'> slurp.rb:351:in `log_node_count'> Nodes: 0; Traits: 0; MetaData: 0
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12:10:19
(infos)
each.rb:9:in `each'> slurp.rb:275:in `block in load_csv'> Importing 128000 rows from publish_metadata_chunk_2.csv
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12:06:18
(infos)
each.rb:9:in `each'> slurp.rb:329:in `block in break_up_large_file'> Waiting 4 minutes for the part 2 of 24 to be added to neo4j.
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12:06:18
(infos)
each.rb:9:in `each'> slurp.rb:351:in `log_node_count'> Nodes: 0; Traits: 0; MetaData: 0
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12:05:51
(infos)
each.rb:9:in `each'> slurp.rb:275:in `block in load_csv'> Importing 128000 rows from publish_metadata_chunk_1.csv
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12:05:50
(warns)
fast.rb:334:in `publish_traits'> slurp.rb:308:in `break_up_large_files'> Found 2980195 rows, will break up into 24 of 128000
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12:05:49
(infos)
fast.rb:334:in `publish_traits'> slurp.rb:592:in `add_metadata'> adding new metadata
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12:05:49
(infos)
fast.rb:334:in `publish_traits'> slurp.rb:351:in `log_node_count'> Nodes: 0; Traits: 0; MetaData: 0
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12:05:46
(infos)
fast.rb:334:in `publish_traits'> slurp.rb:275:in `block in load_csv'> Importing 128000 rows from publish_traits_1676047141.tsv
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12:05:46
(infos)
fast.rb:334:in `publish_traits'> slurp.rb:582:in `add_traits'> adding new traits
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12:05:46
(infos)
fast.rb:334:in `publish_traits'> slurp.rb:611:in `remove_traits'> not removing any traits
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12:05:02
(infos)
slurp.rb:20:in `load_resource_from_repo'> content_server_connection.rb:104:in `log_info'> Connecting to https://content.eol.org/ ...
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12:05:02
(infos)
slurp.rb:20:in `load_resource_from_repo'> content_server_connection.rb:104:in `log_info'> /data/Globi/publish_traits_1676047141.tsv: Scheme missing.
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12:05:02
(warns)
slurp.rb:20:in `load_resource_from_repo'> content_server_connection.rb:112:in `log_warn'> USING wget TO RETRIEVE FULL FILE...
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12:05:02
(warns)
slurp.rb:20:in `load_resource_from_repo'> content_server_connection.rb:112:in `log_warn'> TRUNCATED RESPONSE! Got 183480068 bytes out of 798115280 from https://content.eol.org/data/Globi/publish_traits_1676047141.tsv
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12:04:50
(infos)
slurp.rb:20:in `load_resource_from_repo'> content_server_connection.rb:104:in `log_info'> Connecting to https://content.eol.org/ ...
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12:04:50
(infos)
slurp.rb:20:in `load_resource_from_repo'> content_server_connection.rb:104:in `log_info'> polling for trait diff metadata: /resources/20/publish_diffs.json
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12:04:50
(starts)
resource.rb:225:in `publish'> fast.rb:202:in `publish_traits_with_cleanup'> #publish_traits = TraitBank::Slurp.load_resource_from_repo
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12:04:50
(starts)
resource.rb:225:in `publish'> fast.rb:202:in `publish_traits_with_cleanup'> Running
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12:04:50
(warns)
fast.rb:155:in `by_resource'> page_creator.rb:22:in `by_node_pks'> There were NO new pages, skipping...
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12:03:26
(starts)
fast.rb:155:in `by_resource'> page_creator.rb:5:in `by_node_pks'> create_new_pages
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12:03:22
(starts)
resource.rb:225:in `publish'> fast.rb:154:in `by_resource'> PageCreator
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12:03:22
(starts)
resource.rb:225:in `publish'> fast.rb:154:in `by_resource'> Running
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12:03:22
(starts)
resource.rb:225:in `publish'> fast.rb:150:in `by_resource'> restoring vernacular preferences...
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12:03:22
(starts)
resource.rb:225:in `publish'> fast.rb:150:in `by_resource'> Running
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12:03:22
(warns)
fast.rb:246:in `grab_file'> content_server_connection.rb:112:in `log_warn'> MISSING https://content.eol.org/data/Globi/publish_content_sections.tsv [404] (8 bytes); skipping
