dcsimg

Import Log for World Register of Marine Species

  • Started: December 27, 2022 12:14
  • Completed: 14:45:47.000
  • Failed: No.
  • Status: completed

Events (most recent first):

  • 14:45:47.000 (ends) Complete
  • 14:45:47.000 (ends) TOTAL TIME: 2.1h
  • 14:45:46.000 (infos) Removing trait and metadata files
  • 14:45:44.000 (infos) Importing 128000 rows from publish_metadata.tsv
  • 14:45:44.000 (infos) adding new metadata
  • 14:44:38.000 (infos) Importing 128000 rows from publish_traits_1658252355_chunk_11.csv
  • 14:42:59.000 (infos) Importing 128000 rows from publish_traits_1658252355_chunk_10.csv
  • 14:22:58.000 (infos) Waiting 20 minutes for the last 'chunk' to be added to neo4j...
  • 14:21:35.000 (infos) Importing 128000 rows from publish_traits_1658252355_chunk_9.csv
  • 14:03:34.000 (infos) Waiting 18 minutes for the last 'chunk' to be added to neo4j...
  • 14:02:24.000 (infos) Importing 128000 rows from publish_traits_1658252355_chunk_8.csv
  • 13:46:23.000 (infos) Waiting 16 minutes for the last 'chunk' to be added to neo4j...
  • 13:45:00.000 (infos) Importing 128000 rows from publish_traits_1658252355_chunk_7.csv
  • 13:31:00.000 (infos) Waiting 14 minutes for the last 'chunk' to be added to neo4j...
  • 13:29:38.000 (infos) Importing 128000 rows from publish_traits_1658252355_chunk_6.csv
  • 13:17:37.000 (infos) Waiting 12 minutes for the last 'chunk' to be added to neo4j...
  • 13:16:15.000 (infos) Importing 128000 rows from publish_traits_1658252355_chunk_5.csv
  • 13:06:14.000 (infos) Waiting 10 minutes for the last 'chunk' to be added to neo4j...
  • 13:04:51.000 (infos) Importing 128000 rows from publish_traits_1658252355_chunk_4.csv
  • 12:56:51.000 (infos) Waiting 8 minutes for the last 'chunk' to be added to neo4j...
  • 12:54:57.000 (infos) Importing 128000 rows from publish_traits_1658252355_chunk_3.csv
  • 12:48:56.000 (infos) Waiting 6 minutes for the last 'chunk' to be added to neo4j...
  • 12:47:32.000 (infos) Importing 128000 rows from publish_traits_1658252355_chunk_2.csv
  • 12:43:31.000 (infos) Waiting 4 minutes for the last 'chunk' to be added to neo4j...
  • 12:42:01.000 (infos) Importing 128000 rows from publish_traits_1658252355_chunk_1.csv
  • 12:42:01.000 (warns) Found 1383116 rows, will break up into 128000
  • 12:42:01.000 (infos) adding new traits
  • 12:42:01.000 (infos) removing all traits
  • 12:42:00.000 (infos) Connecting to https://content.eol.org/ ...
  • 12:41:52.000 (infos) Connecting to https://content.eol.org/ ...
  • 12:41:52.000 (infos) polling for trait diff metadata: /resources/533/publish_diffs.json
  • 12:41:52.000 (starts) #publish_traits = TraitBank::Slurp.load_resource_from_repo
  • 12:41:52.000 (starts) Running
  • 12:17:47.000 (ends) Complete
  • 12:17:47.000 (ends) TOTAL TIME: 3.7m
  • 12:16:19.000 (starts) #fix_missing_icons (just to be safe)
  • 12:16:19.000 (starts) Running
  • 12:16:18.000 (starts) #propagate_reference_ids
  • 12:16:18.000 (starts) Running
  • 12:16:14.000 (starts) TraitBank::Denormalizer.update_resource_vernaculars
  • 12:16:14.000 (starts) Running
  • 12:16:14.000 (starts) Resource#fix_native_nodes
  • 12:16:14.000 (starts) Running
  • 12:16:14.000 (warns) Trait Publishing failed: code: `fff`, error: `4`, state: `4`, error_context: `plain_socket_send(/seabolt/src/seabolt/src/bolt/communication-plain.c:231), send error code: 32` FROM /usr/local/bundle/bundler/gems/neo4j-ruby-driver-fe5438fb945d/ffi/neo4j/driver/internal/error_handling.rb:90:in `throw' << /app/lib/trait_bank/slurp.rb:24:in `load_resource_from_repo' << /app/app/models/publishing/fast.rb:345:in `publish_traits' << /app/app/models/publishing/fast.rb:209:in `publish_traits_with_cleanup' << /app/app/models/publishing/fast.rb:167:in `by_resource' << /app/app/models/publishing/fast.rb:10:in `by_resource'
  • 12:16:13.000 (infos) Connecting to https://content.eol.org/ ...
  • 12:16:05.000 (infos) Connecting to https://content.eol.org/ ...
  • 12:16:05.000 (infos) polling for trait diff metadata: /resources/533/publish_diffs.json
  • 12:16:05.000 (starts) #publish_traits = TraitBank::Slurp.load_resource_from_repo
  • 12:16:05.000 (starts) Running
  • 12:16:05.000 (infos) #count_contents_per_page found zero content, skipping.