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Started:
April 04, 2021 08:30
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Completed:
08:57:09
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Failed:
No.
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Status:
completed
Events (most recent first):
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08:57:09
(ends)
Complete
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08:57:09
(ends)
TOTAL TIME: 26.8m
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08:57:09
(infos)
Removing /app/tmp/obis_environment_content_sections.tsv
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08:57:09
(infos)
Removing /app/tmp/obis_environment_references.tsv
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08:57:09
(infos)
Removing /app/tmp/obis_environment_image_info.tsv
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08:57:09
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Removing /app/tmp/obis_environment_attributions.tsv
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08:57:09
(infos)
Removing /app/tmp/obis_environment_media.tsv
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08:57:09
(infos)
Removing /app/tmp/obis_environment_articles.tsv
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08:57:09
(infos)
Removing /app/tmp/obis_environment_vernaculars.tsv
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08:57:09
(infos)
Removing /app/tmp/obis_environment_node_ancestors.tsv
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08:57:09
(infos)
Removing /app/tmp/obis_environment_scientific_names.tsv
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08:57:09
(infos)
Removing /app/tmp/obis_environment_identifiers.tsv
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08:57:09
(infos)
Removing /app/tmp/obis_environment_bibliographic_citations.tsv
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08:57:09
(infos)
Removing /app/tmp/obis_environment_nodes.tsv
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08:57:09
(infos)
Removing /app/tmp/obis_environment_referents.tsv
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08:57:07
(starts)
Resource#fix_native_nodes
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08:57:07
(warns)
Trait Publishing failed: The transaction has been terminated. Retry your operation in a new transaction, and you should see a successful result. The transaction has not completed within the specified timeout (dbms.transaction.timeout). You may want to retry with a longer timeout. FROM /usr/local/bundle/bundler/gems/neo4j-ruby-driver-fe5438fb945d/ffi/neo4j/driver/internal/handlers/response_handler.rb:38:in `check_summary_failure' << /app/lib/trait_bank/slurp.rb:449:in `merge_triple' << /app/lib/trait_bank/slurp.rb:348:in `block in load_csv_where' << /app/lib/trait_bank/slurp.rb:348:in `each' << /app/lib/trait_bank/slurp.rb:348:in `load_csv_where' << /app/lib/trait_bank/slurp.rb:246:in `block (2 levels) in load_csv'
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08:51:27
(starts)
#publish_traits = TraitBank::Slurp.load_resource_from_repo
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08:51:27
(starts)
Remove traits
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08:51:27
(starts)
Fixing native nodes...
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08:51:27
(warns)
Skipping reindexing. You should reindex soon.
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08:51:27
(infos)
importing 988 Pages
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importing 1000 Pages
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importing 1000 Pages
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importing 1000 Pages
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importing 1000 Pages
