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Import Log for Global Biotic Interactions

  • Started: March 28, 2022 08:11
  • Completed: 08:14:05.000
  • Failed: No.
  • Status: completed

Events (most recent first):

  • 08:14:05.000 (ends) Complete
  • 08:14:05.000 (ends) TOTAL TIME: 24.0h
  • 08:14:04.000 (starts) TraitBank::Denormalizer.update_resource_vernaculars
  • 08:14:04.000 (starts) Running
  • 08:11:37.000 (starts) Resource#fix_native_nodes
  • 08:11:37.000 (starts) Running
  • 08:11:32.000 (warns) Trait Publishing failed: execution expired (Delayed::Worker.max_run_time is only 86400 seconds) FROM /app/lib/trait_bank/slurp.rb:366:in `sleep' << /app/lib/trait_bank/slurp.rb:366:in `block in break_up_large_file' << /app/lib/trait_bank/slurp.rb:357:in `break_up_large_file' << /app/lib/trait_bank/slurp.rb:343:in `break_up_large_files' << /app/lib/trait_bank/slurp.rb:289:in `load_csv' << /app/lib/trait_bank/slurp.rb:612:in `add_traits'
  • 07:21:25.000 (infos) Waiting 5700 seconds for the last 'chunk' to be added to neo4j...
  • 07:19:59.000 (infos) Importing 128000 rows from publish_traits_chunk_18.csv
  • 05:49:55.000 (infos) Waiting 5400 seconds for the last 'chunk' to be added to neo4j...
  • 05:48:29.000 (infos) Importing 128000 rows from publish_traits_chunk_17.csv
  • 04:23:25.000 (infos) Waiting 5100 seconds for the last 'chunk' to be added to neo4j...
  • 04:21:59.000 (infos) Importing 128000 rows from publish_traits_chunk_16.csv
  • 03:01:50.000 (infos) Waiting 4800 seconds for the last 'chunk' to be added to neo4j...
  • 03:00:21.000 (infos) Importing 128000 rows from publish_traits_chunk_15.csv
  • 01:45:17.000 (infos) Waiting 4500 seconds for the last 'chunk' to be added to neo4j...
  • 01:43:55.000 (infos) Importing 128000 rows from publish_traits_chunk_14.csv
  • 00:33:53.000 (infos) Waiting 4200 seconds for the last 'chunk' to be added to neo4j...
  • 00:32:25.000 (infos) Importing 128000 rows from publish_traits_chunk_13.csv
  • 23:27:23.000 (infos) Waiting 3900 seconds for the last 'chunk' to be added to neo4j...
  • 23:25:58.000 (infos) Importing 128000 rows from publish_traits_chunk_12.csv
  • 22:25:56.000 (infos) Waiting 3600 seconds for the last 'chunk' to be added to neo4j...
  • 22:24:29.000 (infos) Importing 128000 rows from publish_traits_chunk_11.csv
  • 21:29:27.000 (infos) Waiting 3300 seconds for the last 'chunk' to be added to neo4j...
  • 21:27:56.000 (infos) Importing 128000 rows from publish_traits_chunk_10.csv
  • 20:37:55.000 (infos) Waiting 3000 seconds for the last 'chunk' to be added to neo4j...
  • 20:36:25.000 (infos) Importing 128000 rows from publish_traits_chunk_9.csv
  • 19:51:24.000 (infos) Waiting 2700 seconds for the last 'chunk' to be added to neo4j...
  • 19:49:55.000 (infos) Importing 128000 rows from publish_traits_chunk_8.csv
  • 19:29:55.000 (infos) Waiting 1200 seconds for the last 'chunk' to be added to neo4j...
  • 19:28:26.000 (infos) Importing 128000 rows from publish_traits_chunk_7.csv
  • 19:10:55.000 (infos) Waiting 1050 seconds for the last 'chunk' to be added to neo4j...
  • 19:09:29.000 (infos) Importing 128000 rows from publish_traits_chunk_6.csv
  • 18:54:28.000 (infos) Waiting 900 seconds for the last 'chunk' to be added to neo4j...
  • 18:52:16.000 (infos) Importing 128000 rows from publish_traits_chunk_5.csv
  • 18:39:46.000 (infos) Waiting 750 seconds for the last 'chunk' to be added to neo4j...
  • 18:38:06.000 (infos) Importing 128000 rows from publish_traits_chunk_4.csv
  • 18:28:05.000 (infos) Waiting 600 seconds for the last 'chunk' to be added to neo4j...
  • 18:26:35.000 (infos) Importing 128000 rows from publish_traits_chunk_3.csv
  • 18:19:05.000 (infos) Waiting 450 seconds for the last 'chunk' to be added to neo4j...
  • 18:17:36.000 (infos) Importing 128000 rows from publish_traits_chunk_2.csv
  • 18:12:36.000 (infos) Waiting 300 seconds for the last 'chunk' to be added to neo4j...
  • 18:11:07.000 (infos) Importing 128000 rows from publish_traits_chunk_1.csv
  • 18:11:07.000 (warns) Found 5552474 rows, will break up into 128000
  • 18:11:05.000 (infos) adding new traits
  • 08:26:28.000 (infos) removing all traits
  • 08:26:00.000 (infos) Connecting to https://content.eol.org/ ...
  • 08:25:11.000 (infos) Connecting to https://content.eol.org/ ...
  • 08:25:11.000 (infos) polling for trait diff metadata: /resources/20/publish_diffs.json?since=1635200728
  • 08:25:11.000 (starts) #publish_traits = TraitBank::Slurp.load_resource_from_repo