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Started:
April 11, 2024 13:36
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Completed:
18:31:50
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Failed:
No.
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Status:
completed
Events (most recent first):
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10:29:50
(warns)
USING wget TO RETRIEVE FULL FILE...
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10:29:50
(warns)
TRUNCATED RESPONSE! Got 486355287 bytes out of 798115280 from https://content.eol.org/data/Globi/publish_traits_1676047141.tsv
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10:20:58
(warns)
Found 2980195 rows, will break up into 128000
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10:20:13
(warns)
USING wget TO RETRIEVE FULL FILE...
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10:20:13
(warns)
TRUNCATED RESPONSE! Got 581192727 bytes out of 798115280 from https://content.eol.org/data/Globi/publish_traits_1676047141.tsv
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20:16:39
(warns)
Trait Publishing failed: Couldn't load the external resource at: https://eol.org/data/Globi/publish_traits_1676047141_chunk_11.csv FROM /gems/ruby/2.7.0/bundler/gems/neo4j-ruby-driver-fe5438fb945d/ffi/neo4j/driver/internal/handlers/response_handler.rb:38:in `check_summary_failure' << /app/lib/trait_bank/slurp.rb:555:in `merge_triple' << /app/lib/trait_bank/slurp.rb:440:in `block in load_csv_where' << /app/lib/trait_bank/slurp.rb:440:in `each' << /app/lib/trait_bank/slurp.rb:440:in `load_csv_where' << /app/lib/trait_bank/slurp.rb:327:in `block (2 levels) in load_csv'
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20:16:39
(warns)
Exception (Neo4j::Driver::Exceptions::ClientException) FROM: #merge_triple QUERY: {USING PERIODIC COMMIT LOAD CSV WITH HEADERS FROM 'https://eol.org/data/Globi/publish_traits_1676047141_chunk_11.csv' AS row WITH row WHERE (row.determined_by_uri IS NOT NULL AND TRIM(row.determined_by_uri) <> '')
MATCH (trait:Trait { eol_pk: row.eol_pk })
MATCH (determined_by:Term { uri: row.determined_by_uri })}
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20:16:39
(warns)
Exception (Neo4j::Driver::Exceptions::ClientException) QUERY: {USING PERIODIC COMMIT LOAD CSV WITH HEADERS FROM 'https://eol.org/data/Globi/publish_traits_1676047141_chunk_11.csv' AS row WITH row WHERE (row.determined_by_uri IS NOT NULL AND TRIM(row.determined_by_uri) <> '')
MATCH (trait:Trait { eol_pk: row.eol_pk })
MATCH (determined_by:Term { uri: row.determined_by_uri })
MERGE (trait)-[:determined_by]->(determined_by)} MESSAGE: Couldn't load the external resource at: https://eol.org/data/Globi/publish_traits_1676047141_chunk_11.csv
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17:50:55
(warns)
Found 2511025 rows, will break up into 128000
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14:35:07
(warns)
Trait Publishing failed: Couldn't load the external resource at: https://eol.org/data/Globi/publish_metadata_chunk_2.csv FROM /gems/ruby/2.7.0/bundler/gems/neo4j-ruby-driver-fe5438fb945d/ffi/neo4j/driver/internal/handlers/response_handler.rb:38:in `check_summary_failure' << /app/lib/trait_bank/slurp.rb:555:in `merge_triple' << /app/lib/trait_bank/slurp.rb:440:in `block in load_csv_where' << /app/lib/trait_bank/slurp.rb:440:in `each' << /app/lib/trait_bank/slurp.rb:440:in `load_csv_where' << /app/lib/trait_bank/slurp.rb:327:in `block (2 levels) in load_csv'
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14:35:07
(warns)
Exception (Neo4j::Driver::Exceptions::ClientException) FROM: #merge_triple QUERY: {USING PERIODIC COMMIT LOAD CSV WITH HEADERS FROM 'https://eol.org/data/Globi/publish_metadata_chunk_2.csv' AS row WITH row WHERE 1=1
MATCH (metadata:MetaData { eol_pk: row.eol_pk })
MATCH (trait:Trait { eol_pk: row.trait_eol_pk })}
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14:35:07
(warns)
Exception (Neo4j::Driver::Exceptions::ClientException) QUERY: {USING PERIODIC COMMIT LOAD CSV WITH HEADERS FROM 'https://eol.org/data/Globi/publish_metadata_chunk_2.csv' AS row WITH row WHERE 1=1
MATCH (metadata:MetaData { eol_pk: row.eol_pk })
MATCH (trait:Trait { eol_pk: row.trait_eol_pk })
MERGE (trait)-[:metadata]->(metadata)} MESSAGE: Couldn't load the external resource at: https://eol.org/data/Globi/publish_metadata_chunk_2.csv
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14:35:07
(warns)
Exception (Neo4j::Driver::Exceptions::ClientException) QUERY: {USING PERIODIC COMMIT LOAD CSV WITH HEADERS FROM 'https://eol.org/data/Globi/publish_metadata_chunk_2.csv' AS row WITH row WHERE 1=1 MERGE (metadata:MetaData { eol_pk: row.eol_pk })
ON CREATE SET metadata.source = row.source
ON MATCH SET metadata.source = row.source
ON CREATE SET metadata.literal = row.literal
ON MATCH SET metadata.literal = row.literal
ON CREATE SET metadata.measurement = row.measurement
ON MATCH SET metadata.measurement = row.measurement} MESSAGE: Couldn't load the external resource at: https://eol.org/data/Globi/publish_metadata_chunk_2.csv
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14:35:07
(warns)
FAILED on build_nodes query (MetaData), will re-try once...
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14:35:07
(warns)
Couldn't load the external resource at: https://eol.org/data/Globi/publish_metadata_chunk_2.csv
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14:35:07
(warns)
Exception (Neo4j::Driver::Exceptions::ClientException) QUERY: {USING PERIODIC COMMIT LOAD CSV WITH HEADERS FROM 'https://eol.org/data/Globi/publish_metadata_chunk_2.csv' AS row WITH row WHERE 1=1 MERGE (metadata:MetaData { eol_pk: row.eol_pk })
ON CREATE SET metadata.source = row.source
ON MATCH SET metadata.source = row.source
ON CREATE SET metadata.literal = row.literal
ON MATCH SET metadata.literal = row.literal
ON CREATE SET metadata.measurement = row.measurement
ON MATCH SET metadata.measurement = row.measurement} MESSAGE: Couldn't load the external resource at: https://eol.org/data/Globi/publish_metadata_chunk_2.csv
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14:30:40
(warns)
Found 2980195 rows, will break up into 128000
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14:30:06
(warns)
USING wget TO RETRIEVE FULL FILE...
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14:30:06
(warns)
TRUNCATED RESPONSE! Got 295425359 bytes out of 798115280 from https://content.eol.org/data/Globi/publish_traits_1676047141.tsv
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14:29:56
(warns)
There were NO new pages, skipping...
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14:28:31
(warns)
MISSING https://content.eol.org/data/Globi/publish_content_sections.tsv [404] (8 bytes); skipping
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14:28:31
(warns)
MISSING https://content.eol.org/data/Globi/publish_references.tsv [404] (8 bytes); skipping
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14:28:31
(warns)
MISSING https://content.eol.org/data/Globi/publish_image_info.tsv [404] (8 bytes); skipping
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14:28:31
(warns)
MISSING https://content.eol.org/data/Globi/publish_attributions.tsv [404] (8 bytes); skipping
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14:28:31
(warns)
MISSING https://content.eol.org/data/Globi/publish_media.tsv [404] (8 bytes); skipping
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14:28:31
(warns)
MISSING https://content.eol.org/data/Globi/publish_articles.tsv [404] (8 bytes); skipping
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14:28:30
(warns)
MISSING https://content.eol.org/data/Globi/publish_vernaculars.tsv [404] (8 bytes); skipping
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14:18:11
(warns)
MISSING https://content.eol.org/data/Globi/publish_identifiers.tsv [404] (8 bytes); skipping
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14:18:11
(warns)
MISSING https://content.eol.org/data/Globi/publish_bibliographic_citations.tsv [404] (8 bytes); skipping
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14:11:30
(warns)
MISSING https://content.eol.org/data/Globi/publish_referents.tsv [404] (8 bytes); skipping
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14:11:30
(warns)
All existing content has been destroyed for the resource.
