Import Log for BROT plant trait database for Mediterranean

• Started: April 16, 2021 12:46
• Completed: 12:46:55.000
• Failed: No.
• Status: completed

Events (most recent first):

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• 12:46:55.000 (ends) Complete
• 12:46:55.000 (ends) TOTAL TIME: 41.082242031s
• 12:46:54.000 (starts) Resource#fix_native_nodes
• 12:46:54.000 (infos) Removing /app/tmp/BROT_content_sections.tsv
• 12:46:54.000 (infos) Removing /app/tmp/BROT_references.tsv
• 12:46:54.000 (infos) Removing /app/tmp/BROT_image_info.tsv
• 12:46:54.000 (infos) Removing /app/tmp/BROT_attributions.tsv
• 12:46:54.000 (infos) Removing /app/tmp/BROT_media.tsv
• 12:46:54.000 (infos) Removing /app/tmp/BROT_articles.tsv
• 12:46:54.000 (infos) Removing /app/tmp/BROT_vernaculars.tsv
• 12:46:54.000 (infos) Removing /app/tmp/BROT_node_ancestors.tsv
• 12:46:54.000 (infos) Removing /app/tmp/BROT_scientific_names.tsv
• 12:46:54.000 (infos) Removing /app/tmp/BROT_identifiers.tsv
• 12:46:54.000 (infos) Removing /app/tmp/BROT_bibliographic_citations.tsv
• 12:46:54.000 (infos) Removing /app/tmp/BROT_nodes.tsv
• 12:46:54.000 (infos) Removing /app/tmp/BROT_referents.tsv
• 12:46:49.000 (infos) Importing data from meta_traits_41.csv
• 12:46:43.000 (infos) Importing data from traits_41.csv
• 12:46:42.000 (errors) [52557270, http://purl.obolibrary.org/obo/TO_0000207], [52557270, http://purl.obolibrary.org/obo/FLOPO_0008548], [52557270, http://purl.obolibrary.org/obo/FLOPO_0008548], [52557270, http://purl.obolibrary.org/obo/TO_0000492], [52557270, http://purl.obolibrary.org/obo/FLOPO_0003958], [52557270, http://purl.obolibrary.org/obo/FLOPO_0015519], [49299262, http://eol.org/schema/terms/SeedBankLong], [52557270, http://purl.obolibrary.org/obo/TO_0000207], [52557270, http://purl.obolibrary.org/obo/FLOPO_0008548], [52557270, http://purl.obolibrary.org/obo/TO_0000492], [52557270, http://eol.org/schema/terms/SeedBankLong], [49299262, http://purl.obolibrary.org/obo/FLOPO_0900032], [52557270, http://purl.obolibrary.org/obo/FLOPO_0900032], [52557270, http://eol.org/schema/terms/BudSource]
• 12:46:42.000 (errors) [page_id, term_uri] pairs logged above
• 12:46:42.000 (errors) exclusive_to_clade check failed!
• 12:46:42.000 (infos) Running validity checks for traits_41.csv
• 12:46:42.000 (starts) #publish_traits = TraitBank::Slurp.load_resource_from_repo
• 12:46:42.000 (starts) Remove traits
• 12:46:42.000 (starts) Fixing native nodes...
• 12:46:42.000 (warns) Skipping reindexing. You should reindex soon.
• 12:46:42.000 (infos) importing 28 Pages
• 12:46:41.000 (starts) create_new_pages
• 12:46:41.000 (starts) PageCreator
• 12:46:41.000 (starts) restoring vernacular preferences...
• 12:46:37.000 (starts) #propagate_ids ContentSection
• 12:46:35.000 (starts) #import ContentSection
• 12:46:35.000 (warns) MISSING http://content.eol.org/data/BROT/publish_content_sections.tsv [404] (10 bytes); skipping
• 12:46:35.000 (starts) ContentSection
• 12:46:35.000 (starts) #propagate_ids Reference
• 12:46:35.000 (starts) #import Reference
• 12:46:35.000 (warns) MISSING http://content.eol.org/data/BROT/publish_references.tsv [404] (10 bytes); skipping
• 12:46:35.000 (starts) Reference
• 12:46:35.000 (starts) #propagate_ids ImageInfo
• 12:46:34.000 (starts) #import ImageInfo
• 12:46:34.000 (warns) MISSING http://content.eol.org/data/BROT/publish_image_info.tsv [404] (10 bytes); skipping
• 12:46:34.000 (starts) ImageInfo
• 12:46:34.000 (starts) #propagate_ids Attribution
• 12:46:34.000 (starts) #import Attribution
• 12:46:34.000 (warns) MISSING http://content.eol.org/data/BROT/publish_attributions.tsv [404] (10 bytes); skipping
• 12:46:34.000 (starts) Attribution
• 12:46:34.000 (starts) #propagate_ids Medium
• 12:46:34.000 (starts) #import Medium
• 12:46:34.000 (warns) MISSING http://content.eol.org/data/BROT/publish_media.tsv [404] (10 bytes); skipping
• 12:46:34.000 (starts) Medium

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